A Gertych, KA Wawrowsky, E Vishnewsky, E Lindsley, DL Farkas, J Tajbakhsh. Automated quantification of DNA demethylation effects in cells via 3D mapping of nuclear signatures and population homogeneity assessment. Cytometry A. 2009;75A (7):569–583. (With cover story)

A Gertych, D Farkas, J Tajbakhsh. Measuring topology of low-intensity DNA methylation sites for high-throughput assessment of epigenetic drug-induced effects in cancer cells. Experimental Cell Research. 2010;316: 3150–3160.

J Tajbakhsh, A Gertych, WS Fagg, S Hatada, JH Fair. Early in vitro differentiation of mouse definitive endoderm is not correlated with progressive maturation of nuclear DNA methylation patterns. PLoS ONE. 2011;6(7):e21861.

A Gertych, A Joseph, A Walts, S Bose. Automated detection of dual p16/Ki67 nuclear immunoreactivity in liquid-based Pap tests for improved cervical cancer risk stratification. Annals of Biomedical Engineering. 2012 May;40(5):1192–1204.

A Gertych, J Ho Oh, K Wawrowsky, D Weisenberger, J Tajbakhsh. 3-D DNA methylation phenotypes correlate with cytotoxicity levels in prostate and liver cancer cell models. BMC Pharmacology and Toxicology.  2013 Feb;14:11.

J Ho Oh, A Gertych, J Tajbakhsh. Nuclear DNA methylation and chromatin condensation phenotypes are distinct between normally proliferating/aging, rapidly growing/immortal, and senescent cells. Oncotarget. 2013 Mar;4(3):474–493.