Publications

See a complete PubMed list of publications by Wei Yang, PhD.


Selected Key Publications

Yang W, Freeman, MR, Kyprianou N. Personalization of prostate cancer therapy by phosphoproteomics. Nat Rev Urol. 2018 Aug;15(8):483-497. https://www.nature.com/articles/s41585-018-0014-0.

Xie JJ, Jiang YY, Jiang Y, Li CQ, Lim MC, An O, Mayakonda A, Ding LW, Long L, Sun C, Lin LH, Chen L, Wu JY, Wu ZY, Cao Q, Fang WK, Yang W, et al. Super-enhancer-driven long non-coding RNA LINC01503, regulated by TP63, is over-expressed and oncogenic in squamous cell carcinoma. Gastroenterology. 2018 Jun;154(8):2137-2151. https://www.sciencedirect.com/science/article/pii/S0016508518302130.

Reis-Sobreiro M, Chen JF, Novitskya T, You S, Morley S, Steadman K, Gill NK, Eskaros A, Rotinen M, Chu CY, Chung LWK, Tanaka H, Yang W, et al. Emerin deregulation links nuclear shape instability to metastatic potential. Cancer Res. 2018 Nov 1;78(21):6086-6097. http://cancerres.aacrjournals.org/content/78/21/6086.long.

Han B, Zhou B, Qu Y, Gao B, Xu Y, Chung S, Tanaka H, Yang W, Giuliano A, Cui X. FOXC1-induced non-canonical Wnt5a-MMP7 signaling regulates invasiveness in triple-negative breast cancer. Oncogene. 2018 Mar;37(10):1399-1408. https://www.nature.com/articles/s41388-017-0021-2.

Qu Y, Zhou B, Yang W, Han B, Yu-Rice Y, Gao B, Johnson J, Svendsen CN, Freeman MR, Giuliano AE, et al. Transcriptome and proteome characterization of surface ectoderm cells differentiated from human iPSCs. Sci Rep. 2016;6:32007. https://www.nature.com/articles/srep32007.

Minciacchi VR, You S, Spinelli C, Morley S, Zandian M, Aspuria PJ, Cavallini L, Ciardiello C, Reis Sobreiro M, Morello M, Kharmate G, Jang SC, Kim DK, Hosseini-Beheshti E, Tomlinson Guns E, Gleave M, Gho YS, Mathivanan S, Yang W, et al. Large oncosomes contain distinct protein cargo and represent a separate functional class of tumor-derived extracellular vesicles. Oncotarget. 2015 May 10;6(13):11327-11341. https://doi.org/10.18632/oncotarget.3598.

Zhou B, An M, Freeman MR, Yang W. Technologies and challenges in proteomic analysis of protein S-acylation. J Proteomics Bioinform. 2014 Sep;7(9):256-263. https://www.omicsonline.org/open-access/technologies-and-challenges-in-proteomic-analysis-of-protein-sacylation-jpb.1000327.php?aid=30045.

Yang W, Ramachandran A, You S, Jeong HB, Morley S, Mulone MD, Logvinenko T, Kim J, Hwang D, Freeman MR, Adam RM. Integration of proteomic and transcriptomic profiles identifies a novel PDGF-MYC network in human smooth muscle cells. Cell Commun Signal. 2014 Aug 1;12:44. http://www.biosignaling.com/content/12/1/44.

Yang W, Kim Y, Kim TK, Keay SK, Kim KP, Steen H, Freeman MR, Hwang D, Kim J. Integration analysis of quantitative proteomics and transcriptomics data identifies potential targets of frizzled-8 protein-related antiproliferative factor in vivo. BJU Int. 2012 Dec;110(11 Pt C):E1138-1146. https://onlinelibrary.wiley.com/doi/full/10.1111/j.1464-410X.2012.11299.x.

Dowal L, Yang W, Freeman MR, Steen H, Flaumenhaft R. Proteomic analysis of palmitoylated platelet proteins. Blood. 2011 Sep 29;118(13):e62-73. http://www.bloodjournal.org/content/118/13/e62?sso-checked=true.

Yang W, Chung YG, Kim Y, Kim TK, Keay SK, Zhang CO, Ji M, Hwang D, Kim KP, Steen H, et al. Quantitative proteomics identifies a β-catenin network as an element of the signaling response to Frizzled-8 protein-related antiproliferative factor. Mol Cell Proteomics. 2011 Jun;10(6):M110.007492. http://www.mcponline.org/content/10/6/M110.007492.long.

Yang W, Cai Q, Lui VWY, Everley PA, Kim J, Bhola N, Quesnelle KM, Zetter BR, Steen H, Freeman MR, Grandis JR. Quantitative proteomics analysis reveals molecular networks regulated by epidermal growth factor receptor level in head and neck cancer. J. Proteome Res. 2010 Jun 4;9(6):3073-3082. http://pubs.acs.org/doi/abs/10.1021/pr901211j.

Yang W, Di Vizio D, Kirschner M, Steen H, Freeman MR. Proteome scale characterization of human S-acylated proteins in lipid raft-enriched and non-raft membranes. Mol Cell Proteomics. 2010 Jan;9(1):54-70. http://www.mcponline.org/content/9/1/54.long.

Yang W, Steen H, Freeman MR. Proteomic approaches to the analysis of multiprotein signaling complexes. Proteomics. 2008 Feb;8(4):832-851. https://onlinelibrary.wiley.com/doi/abs/10.1002/pmic.200700650.

Yang W, Liu P, Liu Y, Wang Q, Tong Y, Ji J. Proteomic analysis of rat pheochromocytoma PC12 cells. Proteomics. 2006 May;6(10):2982-2990. https://onlinelibrary.wiley.com/doi/abs/10.1002/pmic.200500036.